BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E09SP1|AL429918
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1549 0.0
>3x_Contig1807
Length = 66587
Score = 1549 bits (780), Expect = 0.0
Identities = 782/784 (99%)
Strand = Plus / Minus
Query: 1 gtgcatacaaatactacactattgcgacagatcttatacctgcagttcatgcagctccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39375 gtgcatacaaatactacactattgcgacagatcttatacctgcagttcatgcagctccaa 39316
Query: 61 atattgatggattttgtgggcttgtgttaatggcaaattttatgaccattatgataccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39315 atattgatggattttgtgggcttgtgttaatggcaaattttatgaccattatgataccgt 39256
Query: 121 tagaaggccaactatatctatccaacaatgctctcgaagtcgctgttgctctcaattttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39255 tagaaggccaactatatctatccaacaatgctctcgaagtcgctgttgctctcaattttc 39196
Query: 181 ataaacgagagagttacgacgagatgatcgtatctwatccagctcaacttggagttttcc 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 39195 ataaacgagagagttacgacgagatgatcgtatctaatccagctcaacttggagttttcc 39136
Query: 241 tcctattttggaatttatggtgctcatcgtgcatgttagcgacactcctgggaaagcagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39135 tcctattttggaatttatggtgctcatcgtgcatgttagcgacactcctgggaaagcagc 39076
Query: 301 cttttttaactttggataatatatcacttccaccaccgcatcaaatgcaacatacagtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39075 cttttttaactttggataatatatcacttccaccaccgcatcaaatgcaacatacagtca 39016
Query: 361 gctcaagcccgctgtcaataaatttcatgcgactgagaatccaattagccacgctccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39015 gctcaagcccgctgtcaataaatttcatgcgactgagaatccaattagccacgctccaaa 38956
Query: 421 cgaagattttccaacgattatatgtatacggttcactgaacaaagtattgtttcaggaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38955 cgaagattttccaacgattatatgtatacggttcactgaacaaagtattgtttcaggaaa 38896
Query: 481 tagaaacagagcttagcttgctttctactcaaatatccaatatgaagtgctatcctatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38895 tagaaacagagcttagcttgctttctactcaaatatccaatatgaagtgctatcctatat 38836
Query: 541 acgacgagggattattctacagaagtaaagtactaatgttagagctttcttgcctaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38835 acgacgagggattattctacagaagtaaagtactaatgttagagctttcttgcctaaaag 38776
Query: 601 ctcacaacgcatttcttctatatcggccaaacctaatccaaaagaagtccttacatgcgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38775 ctcacaacgcatttcttctatatcggccaaacctaatccaaaagaagtccttacatgcgg 38716
Query: 661 tggacgcagcaaagcacataatattggagatttggagccattacaccaagcaatttccca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38715 tggacgcagcaaagcacataatattggagatttggagccattacaccaagcaatttccca 38656
Query: 721 agaatgagaaagatctggttgaccatttagattggracttcagttatccactacggacgg 780
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 38655 agaatgagaaagatctggttgaccatttagattggaacttcagttatccactacggacgg 38596
Query: 781 catc 784
||||
Sbjct: 38595 catc 38592
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4987
Number of Sequences: 1807
Number of extensions: 4987
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)